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MPI Building Issues
- Wenzheng Kuang
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3 years 9 months ago - 3 years 9 months ago #3594
by Wenzheng Kuang
MPI Building Issues was created by Wenzheng Kuang
Greetings,
I am trying to rebuild the MPI version of NGSolve on Ubuntu 18.04.5 LTS following our past guidelines, which worked for me about half a year ago. But this time I am confronted with consistent failures after the command "sudo make -j12":
My cmake file is as below:
In the "ccmake .", I also changed "MKL_BLACS_LIBRARY" to "....../libmkl_blacs_intelmpi_lp64.a".
As long as MPI and MKL are turned OFF (the plain version), the installation works well. I don't quite understand what this error is and how to fix it, could you please help me out with this? Thank you in advance!
UPDATE 03/17:
I installed mpi4py together with mpich. Then the problem seems to arsie from "HYPRE" part. The "sudo make -j12" would fail in downloading HYPRE and ended up with the error "recipe for target 'all' failed". Could you please provide some insight into this?
I am trying to rebuild the MPI version of NGSolve on Ubuntu 18.04.5 LTS following our past guidelines, which worked for me about half a year ago. But this time I am confronted with consistent failures after the command "sudo make -j12":
Code:
CMake Error in CMakeLists.txt:
Target "netgen_metis" INTERFACE_INCLUDE_DIRECTORIES property contains path:
"/home/wenzheng/NG/ngsolve-src/external_dependencies/netgen/MPI4PY_INCLUDE_DIR-NOTFOUND"
which is prefixed in the source directory.
......
......
-- Build files have been written to: /home/wenzheng/NG/ngsolve-build/netgen/netgen
CMakeFiles/netgen.dir/build.make:108: recipe for target 'dependencies/src/netgen-stamp/netgen-configure' failed
make[5]: *** [dependencies/src/netgen-stamp/netgen-configure] Error 1
CMakeFiles/Makefile2:99: recipe for target 'CMakeFiles/netgen.dir/all' failed
make[4]: *** [CMakeFiles/netgen.dir/all] Error 2
Makefile:129: recipe for target 'all' failed
make[3]: *** [all] Error 2
CMakeFiles/netgen_project.dir/build.make:110: recipe for target 'dependencies/Stamp/netgen_project/netgen_project-build' failed
make[2]: *** [dependencies/Stamp/netgen_project/netgen_project-build] Error 2
CMakeFiles/Makefile2:212: recipe for target 'CMakeFiles/netgen_project.dir/all' failed
make[1]: *** [CMakeFiles/netgen_project.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
-- suitesparse download command succeeded. See also /home/wenzheng/NG/ngsolve-build/umfpack/src/suitesparse-stamp/suitesparse-download-*.log
......
......
Makefile:151: recipe for target 'all' failed
make: *** [all] Error 2
My cmake file is as below:
Code:
cmake \
-DUSE_PYTHON=ON \
-DUSE_UMFPACK=ON \
-DPYTHON_EXECUTABLE=/usr/bin/python3 \
-DCMAKE_PREFIX_PATH=~/NG/ngsolve-install \
-DCMAKE_BUILD_TYPE=Release \
-DINSTALL_DIR=~/NG/ngsolve-install \
-DUSE_GUI=ON \
-DUSE_MPI=ON \
-DUSE_MUMPS=ON \
-DUSE_HYPRE=ON \
-DUSE_MKL=ON \
-DMKL_STATIC=ON \
-DMKL_ROOT=$HOME/intel/oneapi/mkl/latest \
-DCMAKE_CXX_COMPILER=/usr/bin/g++-8 \
-DCMAKE_C_COMPILER=/usr/bin/gcc-8 \
../ngsolve-src
In the "ccmake .", I also changed "MKL_BLACS_LIBRARY" to "....../libmkl_blacs_intelmpi_lp64.a".
As long as MPI and MKL are turned OFF (the plain version), the installation works well. I don't quite understand what this error is and how to fix it, could you please help me out with this? Thank you in advance!
UPDATE 03/17:
I installed mpi4py together with mpich. Then the problem seems to arsie from "HYPRE" part. The "sudo make -j12" would fail in downloading HYPRE and ended up with the error "recipe for target 'all' failed". Could you please provide some insight into this?
Last edit: 3 years 9 months ago by Wenzheng Kuang.
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